Visualising whole-slide images, annotations  and RoIS

Whole-slide images are stored in the Aperio .svs file format as multi-resolution pyramid structures. For some WSIs, a file in the .qpdata  file format having the same filename of the WSI is provided for viewing the annotations inside the WSI. The RoIs images are provided in .png file format.

For visualizing the slides and viewing the annotations, we  strongly recommend to use the QuPath that is  an open software platform for whole slide image.

Other different libraries and open source platforms can be used to read the WSIs, some of these are:

The RoI images can be visualized using standard image tools.